PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060684.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 452aa MW: 49917.1 Da PI: 5.2882

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060684.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.5	4.4e-12	251	297	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++h + Er RR +N++f Lr+l+P++ K++ a+i+ A++YI++L Oeu060684.1 251 TKHFATERGRRVLLNDKFKALRSLVPNP-----IKNDRASIVGDAIDYINEL 297 78***********************9.....69************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MYEGSGCFDP SNMQQQEGLI QAEDGFSQTH IPNCSNPSFS MEEHSNYPLN HPIQQDVAAA 60 VLEMELQQQI IQQGETHLMQ EILHDSNWQD MSNFNGNMNQ YSLPETPYTT TPDLLNMFSL 120 PRCSPSTASL LPNSSLSFPN SAHKSPNFLA SVGLLGDLNP VDGASASASV IYDPLLPLNL 180 PPQPPLLRDL LHSLPHGGYA TGGSRTSGSL FPGMVDERDV NGGDGRHFDN GVFVFNGDMD 240 CIGKNKNGKD TKHFATERGR RVLLNDKFKA LRSLVPNPIK NDRASIVGDA IDYINELKRT 300 VNELNVLVEK KRCSKERLKR TKREGDTMEG NIDTKSLDDM GQPYNGSSLR SSWLHRKSNN 360 TEVDVRIVDD EVTVKLVQQK RTNCLLLVSK VLEELQLDLN HVAGGLIGDY YSFLFNSKIC 420 EGSIVYASAI ANKLIEVVDK QYAAIPPTNS Y*

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MYEGSGCFDP SNMQQQEGLI QAEDGFSQTH IPNCSNPSFS MEEHSNYPLN HPIQQDVAAA  60
VLEMELQQQI IQQGETHLMQ EILHDSNWQD MSNFNGNMNQ YSLPETPYTT TPDLLNMFSL  120
PRCSPSTASL LPNSSLSFPN SAHKSPNFLA SVGLLGDLNP VDGASASASV IYDPLLPLNL  180
PPQPPLLRDL LHSLPHGGYA TGGSRTSGSL FPGMVDERDV NGGDGRHFDN GVFVFNGDMD  240
CIGKNKNGKD TKHFATERGR RVLLNDKFKA LRSLVPNPIK NDRASIVGDA IDYINELKRT  300
VNELNVLVEK KRCSKERLKR TKREGDTMEG NIDTKSLDDM GQPYNGSSLR SSWLHRKSNN  360
TEVDVRIVDD EVTVKLVQQK RTNCLLLVSK VLEELQLDLN HVAGGLIGDY YSFLFNSKIC  420
EGSIVYASAI ANKLIEVVDK QYAAIPPTNS Y*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	5e-82	bHLH family protein