PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060682.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | bHLH | ||||||||
Protein Properties | Length: 247aa MW: 28111 Da PI: 6.2576 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 28.2 | 3.4e-09 | 37 | 84 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 ++h Er R +N++f Lr+l+P++ +K + a+++ A+eYI++Lq Oeu060682.1 37 TKHLTTERHKRVLLNDKFMALRSLVPNS-----TKKDRASVVGDAIEYINELQ 84 678889999999***************9.....8******************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 247 aa Download sequence |
MDERDVNGGD GRHFDDGVFD FTGDIDCISK IRVEKDTKHL TTERHKRVLL NDKFMALRSL 60 VPNSTKKDRA SVVGDAIEYI NELQRTVNEL KVLVEKKRCC KERLKRAKIE DDTMEGNIDT 120 QSVDDMKQPY NASSLRSSWL HRKSKNTEVD VRIVDDEVTV KLVQQKRTNC LLLVSKVLEE 180 LQLDLDHVAG GLIEDYYSFL FNSKICEGSI VYASTIANKL IEFVDKQYAA IPPTNSYYAC 240 IHVGVF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G31210.1 | 3e-65 | bHLH family protein |