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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060414.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 255aa MW: 28679.5 Da PI: 9.765 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 50.7 | 7.4e-16 | 1 | 106 | 1 | 92 |
GAGA_bind 1 mdddgsre..rnkg.yye..........paaslk.enlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllal 84 mdd g+re r++ yy+ +a++l+ n++ ++ + +erda+i+er+ al+ekk a++erd a +qrd+ +aer++a+ erdn+++al Oeu060414.1 1 MDDGGNREnrRQRMdYYKvppwnmispfQAKELNaLNINPRVTMLCNERDAAIEERDRALAEKKTALNERDAAIQQRDAVIAERDNAVRERDNAIAAL 98 999999988777778*********99985545541468888999999*************************************************** PP GAGA_bind 85 llvensla 92 ++++ l+ Oeu060414.1 99 QFQDALLN 106 *9876554 PP | |||||||
2 | GAGA_bind | 246 | 2.5e-75 | 114 | 254 | 160 | 301 |
GAGA_bind 160 kekkak.kkkkksekskkkvkkesaderskaekksidlvl.ng.vslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaR 254 k++k+ k+k+ s++ +++v++ + skae++ +d+++ n+ +++Des++PvPvCsCtG++r CYkWGnGGWqS+CCt ++SvyPLP+++++r+aR Oeu060414.1 114 KATKSPrKAKRVSKDLNRHVTT----DGSKAEWDAQDFGImNQlIQFDESSMPVPVCSCTGVSRHCYKWGNGGWQSSCCTNSLSVYPLPQMPNKRHAR 207 3333321444444444444444....4599********7745449***************************************************** PP GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 ++grKmS g+f++lL +LaaeG+dls p+DLkd+WAkHGtn+++ti+ Oeu060414.1 208 MGGRKMSAGVFSRLLTRLAAEGHDLSVPLDLKDYWAKHGTNRYITIK 254 **********************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 255 aa Download sequence |
MDDGGNRENR RQRMDYYKVP PWNMISPFQA KELNALNINP RVTMLCNERD AAIEERDRAL 60 AEKKTALNER DAAIQQRDAV IAERDNAVRE RDNAIAALQF QDALLNAIKG TPSKATKSPR 120 KAKRVSKDLN RHVTTDGSKA EWDAQDFGIM NQLIQFDESS MPVPVCSCTG VSRHCYKWGN 180 GGWQSSCCTN SLSVYPLPQM PNKRHARMGG RKMSAGVFSR LLTRLAAEGH DLSVPLDLKD 240 YWAKHGTNRY ITIK* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 1e-100 | BBR-BPC family protein |