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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu060305.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | NF-YA | ||||||||
Protein Properties | Length: 162aa MW: 18065.3 Da PI: 10.0412 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 101.5 | 8.2e-32 | 69 | 125 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++I++RRq+Rak+e e+k +ksrkpylheSRh hAlrR+Rg gGrF Oeu060305.1 69 EEPVFVNAKQYHGIMRRRQSRAKAELESKA-AKSRKPYLHESRHLHALRRARGMGGRF 125 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 162 aa Download sequence |
MHYASPALGV GNAMAQTAYP YPDPYYRSIF SPYDTPPYPS QPYPSQPMVH LQLMGIQQAG 60 VPLPSDAVEE PVFVNAKQYH GIMRRRQSRA KAELESKAAK SRKPYLHESR HLHALRRARG 120 MGGRFQKKNE NQQKEVQSGD QSQANINLNL EKNAPTSSES A* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 5e-46 | NF-YA family protein |