PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu060056.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 330aa MW: 37160.4 Da PI: 9.8119

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu060056.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.1	1.1e-18	32	124	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkr...tsessstcpyfdqle 86 +Wt++e+laLi+a+re++ +lrrg l+ ++W++v++ + ++ ++ +++ qC++k+e+l++ry+++k+++ + + + s++ +fd ++ Oeu060056.1 32 CWTQEETLALIDAYRERWYALRRGYLRTADWDAVAAIInsrfSDAPIPKTSAQCRHKMEKLRQRYRAEKQRSLSYpypAGRFISSWFFFDYMD 124 8**********************************9999999***********************998775322245566777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 330 aa Download sequence
MSSTATATTL AVGDVVATET VEKPPRRFPP PCWTQEETLA LIDAYRERWY ALRRGYLRTA 60 DWDAVAAIIN SRFSDAPIPK TSAQCRHKME KLRQRYRAEK QRSLSYPYPA GRFISSWFFF 120 DYMDAMENGT DPPSADTGSE QEEDHTGFGT KFRSEKTMGG FSVPPLKLKA KNSSKNFGES 180 NANFNISGGF YMKSSGDMIP PGLRIKKLGK PDRRMNPEFH YGDEEYWGLK GGLNPGKAMN 240 GNGAGIKRGR NPVEEMVESI KLLGEGLVKM EKAKMEMARE METARMEMEL KRNEMILESQ 300 RQIVDAFVKG LFELKKNKKS KITTVPSDS*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G44730.1	8e-45	Trihelix family protein