PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu059979.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

C2H2

Protein Properties

Length: 462aa MW: 51104.3 Da PI: 9.5522

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu059979.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	19.1	3.6e-06	59	81	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F+r nL+ H r H Oeu059979.1 59 FICEICNKGFRRDQNLQLHRRGH 81 89*******************88 PP
2	zf-C2H2	12.9	0.00034	136	158	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k + +s+ k H +t+ Oeu059979.1 136 WKCEKCSKKYAVQSDWKAHSKTC 158 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 462 aa Download sequence
MSVDEFSVAN MFPQEPETNP NPQSNSKPTA KKKRLPGNPD PDAQVIALSP ITLMATNRFI 60 CEICNKGFRR DQNLQLHRRG HNLPWKLKQR ANKDQIIKKV YICPENTCVH HDPSRALGDL 120 TGIKKHFSRK HGEKKWKCEK CSKKYAVQSD WKAHSKTCGT REYKCDCGTL FSRKDSFITH 180 RAFCDALAEE SARSMITASA NKLNFRNDNL NGPMMNPNCN GVNSGNSLVG DQQKPRLSLW 240 LDQANSHQHN FVDMNYNPSL FIPSSSTGLP DMPQMTSSFG NYLLPRRQGL MEEEVIGKRS 300 TMDQILASLY SDNEKQQSNS SASMSASALL QRAAQMGSTR TNPTFFGNAF GVMNSSSSSS 360 NSPNANSLAQ NRSELHQVFG EQPKSFNDKA RDSMMEGSNL KQTSATQSQA FSVNLHGVEH 420 SLTRDFLGMG GEGGNPFSPQ QLAKFASMSS ALGLSQFSSN H*

Sequence ? help Back to Top

Protein Sequence Length: 462 aa Download sequence

MSVDEFSVAN MFPQEPETNP NPQSNSKPTA KKKRLPGNPD PDAQVIALSP ITLMATNRFI  60
CEICNKGFRR DQNLQLHRRG HNLPWKLKQR ANKDQIIKKV YICPENTCVH HDPSRALGDL  120
TGIKKHFSRK HGEKKWKCEK CSKKYAVQSD WKAHSKTCGT REYKCDCGTL FSRKDSFITH  180
RAFCDALAEE SARSMITASA NKLNFRNDNL NGPMMNPNCN GVNSGNSLVG DQQKPRLSLW  240
LDQANSHQHN FVDMNYNPSL FIPSSSTGLP DMPQMTSSFG NYLLPRRQGL MEEEVIGKRS  300
TMDQILASLY SDNEKQQSNS SASMSASALL QRAAQMGSTR TNPTFFGNAF GVMNSSSSSS  360
NSPNANSLAQ NRSELHQVFG EQPKSFNDKA RDSMMEGSNL KQTSATQSQA FSVNLHGVEH  420
SLTRDFLGMG GEGGNPFSPQ QLAKFASMSS ALGLSQFSSN H*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G45260.1	5e-98	C2H2 family protein