PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu059061.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 229aa MW: 24827.8 Da PI: 5.3477 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 73 | 120 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+G+r +++ +Wv+eIr+p++ ++r++lg++ t+e+Aa+a++ a+++l+g Oeu059061.1 73 YRGIR--SRSSKWVSEIREPRK---TTRIWLGTYPTPEMAAAAYDVAALALKG 120 99**7..4567********843...5************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MIQLAEQYPQ PRKEASNSPP PPLLCSNVHQ GDQSRSRKLP SIRKVQTNKA SGMGSTSSGG 60 STSRPSGGKH PMYRGIRSRS SKWVSEIREP RKTTRIWLGT YPTPEMAAAA YDVAALALKG 120 NDTILNFPYH ISSYQVPVSP SASDIQRAAA SAAELMNPET TKEAAVDEPD SANAQIVPSG 180 NDFIDEEELF DMPNLLVEMA EGMLLSPPRM LTDDSPGSLN TESLWSYF* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G52020.1 | 3e-42 | ERF family protein |