PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Oeu059025.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 391aa MW: 42931.3 Da PI: 4.5046 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 60.4 | 4.1e-19 | 122 | 171 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+G+r+++ +g+W+AeIrdp++ r++lg+f taeeAa+a++ +++++g Oeu059025.1 122 QYRGIRQRP-WGKWAAEIRDPRK---GVRVWLGTFNTAEEAARAYDIEARRIRG 171 69*******.**********954...4************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 391 aa Download sequence |
MCGGAIISDL LLPSRTSRKL TADLLWGSGG GGAADLGNGK RKIPGSNHSK LLRSKPVVHI 60 DDDFEADFQD FKDRSDDEVV TDVKPFAFSA SKNSNLRGSK SVKSTESDED SEKSSKRKRK 120 NQYRGIRQRP WGKWAAEIRD PRKGVRVWLG TFNTAEEAAR AYDIEARRIR GNKAKVNFPE 180 DAPVSATKRA GKVNPCEALP KESSDYVQQS MNQNDMTFMN VLDNGNYDSF SFPEEKPPTN 240 KYSDADFYPS EGVLGVQSLA PSDGVNIYFS SDQESNSLEC SDFGWGENCA KTPEISSVLS 300 AVVEDNQTQF VEDASPAKKL KSDSGDLVPA ENTEDPSFES QMKPFQMPYL DGNWEASLDA 360 FLNGDAIQDG GNEMDLWSFD DVPAMLGGVY * |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G53910.3 | 1e-60 | ERF family protein |