PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058895.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family Trihelix
Protein Properties Length: 338aa    MW: 37668.9 Da    PI: 5.8373
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058895.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix88.95.6e-2835129186
     trihelix   1 rWtkqevlaLiearremeerlrrgk.........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  rWt+qe+l+Li+++r  e+r+rrg+         + +p+W++vs++++++g++r+p+qC+++w+nl++++kkike+e k ++e++s +++ ++l+
  Oeu058895.1  35 RWTRQEILVLIQGKRVAENRVRRGRasglafgsaQVEPKWASVSSYCKRHGVNRGPVQCRKRWSNLAGDFKKIKEWELKIREETESFWVMRNDLR 129
                  8**********************866677777779*********************************************9999999*9999986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MSLEQLSLAP GPADGETDGR QQSADDSNKV ARLPRWTRQE ILVLIQGKRV AENRVRRGRA  60
SGLAFGSAQV EPKWASVSSY CKRHGVNRGP VQCRKRWSNL AGDFKKIKEW ELKIREETES  120
FWVMRNDLRR ERKLPGFFDR EVYDILDGGE EEGASGLALA PSVAPTGDEG GKQVEAEALF  180
DSGRSAAADD GLFSDFEQSG QEEVGEIPGR GKETPVKGIP APTPISEKQH QSFPQESPAQ  240
GTSHEKPTTS EPDIRNPEDR KKRKRNETGE EREREPTNMQ HRLIEALERN GNLLSSQLEV  300
QNTHLQLDRE QRMDNVNSLI TVLNKLADAL GRIADKL*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1260265RKKRKR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.11e-110Trihelix family protein