PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058731.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 616aa    MW: 69150.8 Da    PI: 6.9425
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058731.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox62.37.5e-202681156
                 TT--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
     Homeobox  1 rrkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
                 +++ +++t++q+++Le++F+++++p+++ r +L+++l+L+ rq+k+WFqNrR+++k
  Oeu058731.1 26 KKRYHRHTAHQIQRLEAMFKECPHPDEKIRLQLSRELNLNPRQIKFWFQNRRTQMK 81
                 688999***********************************************998 PP
2START1749.1e-552254502206
                  HHHHHHHHHHHHHHHC-TT-EEEE....EXCCTTEEEEEEESSS.......SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-S....EEEEEEEE CS
        START   2 laeeaaqelvkkalaeepgWvkss....esengdevlqkfeeskv......dsgealrasgvvdmvlallveellddkeqWdetla....kaetlevi 85 
                  +a  a++el+++ + +ep+W+ks     e++n + + ++ +  ++       ++ea+r+sgvv+m+  +lv  ++d++ +W e ++    +a t+ev+
  Oeu058731.1 225 VAGNAMDELIRLLQTNEPLWMKSTndgrEILNLENYERICPGHNNqlkspnVRIEASRDSGVVIMNGLTLVDMFMDVS-KWMELFPtivsRARTVEVL 321
                  67899*******************9999999999998888655559999999**************************.9*999999999******** PP

                  CTT......EEEEEEEEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--.-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSX CS
        START  86 ssg......galqlmvaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppesssvvRaellpSgiliepksnghskvtwvehvdlkgrl 176
                  ssg      galqlm+ elq+lsplvp R f+f+Ry++q ++g+w+ivd+S d + + ++ +s+ + ++l+Sg+li++++ng+skvtwveh++ ++++
  Oeu058731.1 322 SSGmigipsGALQLMYEELQVLSPLVPtRQFYFLRYCQQIKQGSWAIVDISYDLPHQENQFASSCKTHRLLSGCLIQDMPNGYSKVTWVEHWEIEDKV 419
                  ******************************************************9999889999********************************** PP

                  X.HHHHHHHHHHHHHHHHHHHHHHTXXXXXX CS
        START 177 p.hwllrslvksglaegaktwvatlqrqcek 206
                  p h l+  l++sgla+ga +w++ lqr ce+
  Oeu058731.1 420 PiHGLYMDLIHSGLAFGAEKWLSSLQRICER 450
                  *****************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 616 aa     Download sequence    
MEFSSGYGGG GSGDDHHDAS DPRGGKKRYH RHTAHQIQRL EAMFKECPHP DEKIRLQLSR  60
ELNLNPRQIK FWFQNRRTQM KAQFERADNC ALRAENDKIR CENIAIREAL KNVICPSCGG  120
PPVTEDSYFD EQKLRIENVQ LKEELDRVSS IAAKYIGRPI SQLQPVQPIH VSSLDLSMAS  180
FSGHGMLPEP SLNLHLLPGS STNISNLPFP TMSISDMDKS LMADVAGNAM DELIRLLQTN  240
EPLWMKSTND GREILNLENY ERICPGHNNQ LKSPNVRIEA SRDSGVVIMN GLTLVDMFMD  300
VSKWMELFPT IVSRARTVEV LSSGMIGIPS GALQLMYEEL QVLSPLVPTR QFYFLRYCQQ  360
IKQGSWAIVD ISYDLPHQEN QFASSCKTHR LLSGCLIQDM PNGYSKVTWV EHWEIEDKVP  420
IHGLYMDLIH SGLAFGAEKW LSSLQRICER YACLMGTSNS THEQVGVATL KVIPSSEGKR  480
SMMKLAQRMV NNFCASLNPS NGQQWRTLSG SNDFEVQATL HKSTDPGQPN AIVLSAASTI  540
WLPIPPENVF SFFRDERTRP QWDVLSNQNP VQEVAHIANG SHPGNCISVL RYQIGLNRTI  600
LSSAQLHIII DKISG*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73360.10.0HD-ZIP family protein