PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058691.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB

Protein Properties

Length: 352aa MW: 38668.1 Da PI: 9.41

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058691.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46.3	9.8e-15	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W+++Ede+l + + +G g W++++r g+ R++k+c++rw +yl Oeu058691.2 16 RGMWSPDEDEKLSRHISAYGHGFWSAVPRLAGLQRCGKSCRLRWINYL 63 789*******************************************97 PP
2	Myb_DNA-binding	49.4	1.1e-15	69	112	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g+++++E l++d+++ lG++ W+ Ia++++ gRt++++k++w++ Oeu058691.2 69 KGSFSPQEAALIIDLHNILGNK-WAQIAKHLP-GRTDNEVKNFWNS 112 799*****************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 352 aa Download sequence
MGHGHHKCCN KQKVKRGMWS PDEDEKLSRH ISAYGHGFWS AVPRLAGLQR CGKSCRLRWI 60 NYLRPGLKKG SFSPQEAALI IDLHNILGNK WAQIAKHLPG RTDNEVKNFW NSNIKKKLMA 120 MNLSNMAPVS ELAAISNLAN SARSNVQGLY SVNSNSNLIP TAQIDQAYIP AADPNNPLLQ 180 GFDQVNFNPN LLTPLASFPL SSLDSSAFHL PPLWMPSEYQ KPLLIDHRRQ LNKQEDTSMF 240 ITGGTRAPQF FNLPPLTGTY DDTSAFNGLL ELSQMTNGNQ FGMCSSSVSP VLEPVSAGFS 300 GFPSVLNARK MQIPAVSHIQ FIQSVMPAFN SSSSSSSSLL LDRSLDMVVL D*

Sequence ? help Back to Top

Protein Sequence Length: 352 aa Download sequence

MGHGHHKCCN KQKVKRGMWS PDEDEKLSRH ISAYGHGFWS AVPRLAGLQR CGKSCRLRWI  60
NYLRPGLKKG SFSPQEAALI IDLHNILGNK WAQIAKHLPG RTDNEVKNFW NSNIKKKLMA  120
MNLSNMAPVS ELAAISNLAN SARSNVQGLY SVNSNSNLIP TAQIDQAYIP AADPNNPLLQ  180
GFDQVNFNPN LLTPLASFPL SSLDSSAFHL PPLWMPSEYQ KPLLIDHRRQ LNKQEDTSMF  240
ITGGTRAPQF FNLPPLTGTY DDTSAFNGLL ELSQMTNGNQ FGMCSSSVSP VLEPVSAGFS  300
GFPSVLNARK MQIPAVSHIQ FIQSVMPAFN SSSSSSSSLL LDRSLDMVVL D*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13890.2	9e-72	MYB family protein