PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058658.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

LBD

Protein Properties

Length: 233aa MW: 25604.4 Da PI: 8.7706

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058658.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	134.3	4.6e-42	55	154	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrr+Ca++C+++pyf ++p+kfa vhk+FGasnv+k+l ++pe++r da++slvyeA++r+rdPvyG++g i++lqqq+++l+ael++++ Oeu058658.1 55 PCAACKLLRRRCAQECPFSPYFSPHEPQKFASVHKVFGASNVSKMLMEVPESQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQSLQAELNAVR 152 7**********************************************************************************************998 PP DUF260 99 ee 100 e Oeu058658.1 153 VE 154 65 PP

Sequence ? help Back to Top
Protein Sequence Length: 233 aa Download sequence
MFYSYLALII VVSYIFCRER FEEIGKKIRR ESDAFSHMGR RHMLGPPGTL NTITPCAACK 60 LLRRRCAQEC PFSPYFSPHE PQKFASVHKV FGASNVSKML MEVPESQRAD AANSLVYEAN 120 VRLRDPVYGC MGAISALQQQ VQSLQAELNA VRVEIMKYKY RETNIVPSSH ITLLSSGAVS 180 IAAPPPARLP PQPPPPPPSS LPITSSSSSM YTPPSTAADF STISNDDITY FG*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G40470.1	3e-84	LBD family protein