PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu058478.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family HD-ZIP
Protein Properties Length: 852aa    MW: 93503 Da    PI: 6.0326
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu058478.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.81.8e-182482357
                 --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
     Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                 k  ++t+eq+e+Le++++++++p+  +r++L +++    +++ +q+kvWFqNrR +ek+
  Oeu058478.1 24 KYVRYTPEQVEALERVYAECPKPTSLRRQQLIRECpilsNIEPKQIKVWFQNRRCREKQ 82
                 6789*****************************************************97 PP
2START176.51.6e-551723792204
                  HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEEEEX CS
        START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlmvae 97 
                  +aeea++e++ ka+ ++  Wv++  +++g++++ +++ s+++sg a+ra+g+v  ++   v+e+l+d++ W ++++  +++ vi +g  g+++lm+++
  Oeu058478.1 172 IAEEALAEFLGKATGTAVDWVQMIGMKPGPDSIGIVAISRNCSGVAARACGLVSLEPS-KVAEILKDRLSWFRDCRCLDVMSVIPTGngGTIELMYMQ 268
                  689*******************************************************.8999999999***************************** PP

                  XTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHH CS
        START  98 lqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglae 191
                  ++a+++l++ Rdf+++Ry+ +l++g++vi+++S++s +  p+    + +vRae+lpSg+li+p+++g+s v++v+h+dl++++++++lr+l++s+ + 
  Oeu058478.1 269 TYAPTTLASaRDFWTLRYTTSLEDGSLVICERSLTSSSGAPTgptAPCFVRAEMLPSGCLIRPCEGGGSIVHIVDHFDLDAWSVPEVLRPLYESSKIL 366
                  *************************************999998988999************************************************* PP

                  HHHHHHHHTXXXX CS
        START 192 gaktwvatlqrqc 204
                  ++k+++a+l++ +
  Oeu058478.1 367 AQKMTMAALRHIR 379
                  *********9865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 852 aa     Download sequence    
MALLMHRESN SCGSYSKQQM DASKYVRYTP EQVEALERVY AECPKPTSLR RQQLIRECPI  60
LSNIEPKQIK VWFQNRRCRE KQRKEASRLQ TVNRKLSAMN KLLMEENDRL QKQVSQLVYE  120
NGYMRQQLHT VSAPTTDTSC ESAVMSGQQQ QKNITPQHPE RDANSPAGLL AIAEEALAEF  180
LGKATGTAVD WVQMIGMKPG PDSIGIVAIS RNCSGVAARA CGLVSLEPSK VAEILKDRLS  240
WFRDCRCLDV MSVIPTGNGG TIELMYMQTY APTTLASARD FWTLRYTTSL EDGSLVICER  300
SLTSSSGAPT GPTAPCFVRA EMLPSGCLIR PCEGGGSIVH IVDHFDLDAW SVPEVLRPLY  360
ESSKILAQKM TMAALRHIRQ IAQETNGEIQ CSGGRQPVVL RALSQRLCRG FNDAVNGFVD  420
DGWSILGGDG VEDVTIAINS SPSKFLGSQH NSLSILPSFG GVLCARASML VQNVPPALLV  480
RFLREHRSEW ADYEIDAYSA ASLKASPYAV PCARLSGFPG SQVILPLAQT VEHEELLEVV  540
RLEGHAFSPE EIALSRDMYL LQLCSGVDES TSGACAQLVF APIDESFGDD APLLPSGFRV  600
IPLDAKTDGD GATRTLDLAS TLEVGPSGAR TVGEVDSCKQ SLRSVLTIAF QFTFENHYQD  660
TVAAMARRYV RNIVSSVQRV AMAISPSRLS SQMVPKTLPG SPEAITLARW ICRSYRMHTG  720
GEFLQIDSEA GDAVLKQLWH HSDAIMCCSV KMNASAVFTF ANQAGLDMLE TTLVALQDIM  780
LERILDETGR KLLLSEFSKI MQQGFAYLPA GVCVSSMGRP IAYEQAIAWK VLNDDDSNHC  840
LAFMFVNWSF V*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34710.10.0HD-ZIP family protein