PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu058241.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

MYB_related

Protein Properties

Length: 478aa MW: 54017.2 Da PI: 7.1728

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu058241.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	35.1	3.1e-11	425	475	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT....TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg....kgRtlkqcksrwqkyl 48 g+W ++E++ l +v++ G g+Wk I ++ g +Rt ++k++w++ + Oeu058241.1 425 GKWNADEEDALRTGVEECGEGSWKDILEKYGhrfaDRRTQVDLKDKWRNMK 475 79**********************************************975 PP

Sequence ? help Back to Top
Protein Sequence Length: 478 aa Download sequence
MDIDPIILSW ILEFALKRSV DDCRLKSMLE TFPIPEDNYF LRKMLLLKQL ESDISRNSLL 60 SLTTLEHLEY LEELEYRRGI ENVSDAMKTA YCEVAVEYTV KYLRNEDGDG GKFCDAVKSV 120 WTCRVRKLEK EVEKGGLGSD ELFDWRLKME AAVQDHGVRQ RLVKKSKDVN AVDALRAYLK 180 EEREGRGPSF LELVADKLKN DETLKKLLGL ANANRILPKE TVLQSVDPGS AVTNDNRALQ 240 KDAALSRKLI GKKHARVRSG TCRGAKISES DCLEVCPGSK CNLPPTPEVN RIQEALESSR 300 MDLQASVKDP LPNELEFAEE VVDAMRGSTD HDPIQEDHVK HNTSAMKVAG FVRANGGNPS 360 NGPRPSLMER NSAARTHEWD DSIENSSEES PDQGSRIKLP SPKRRRVSPL ISNGSEQPKK 420 RRRVGKWNAD EEDALRTGVE ECGEGSWKDI LEKYGHRFAD RRTQVDLKDK WRNMKRS*

Sequence ? help Back to Top

Protein Sequence Length: 478 aa Download sequence

MDIDPIILSW ILEFALKRSV DDCRLKSMLE TFPIPEDNYF LRKMLLLKQL ESDISRNSLL  60
SLTTLEHLEY LEELEYRRGI ENVSDAMKTA YCEVAVEYTV KYLRNEDGDG GKFCDAVKSV  120
WTCRVRKLEK EVEKGGLGSD ELFDWRLKME AAVQDHGVRQ RLVKKSKDVN AVDALRAYLK  180
EEREGRGPSF LELVADKLKN DETLKKLLGL ANANRILPKE TVLQSVDPGS AVTNDNRALQ  240
KDAALSRKLI GKKHARVRSG TCRGAKISES DCLEVCPGSK CNLPPTPEVN RIQEALESSR  300
MDLQASVKDP LPNELEFAEE VVDAMRGSTD HDPIQEDHVK HNTSAMKVAG FVRANGGNPS  360
NGPRPSLMER NSAARTHEWD DSIENSSEES PDQGSRIKLP SPKRRRVSPL ISNGSEQPKK  420
RRRVGKWNAD EEDALRTGVE ECGEGSWKDI LEKYGHRFAD RRTQVDLKDK WRNMKRS*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	403	407	KRRRV
2	403	423	KRRRVSPLISNGSEQPKKRRR
3	404	424	KRRRVSPLISNGSEQPKKRRR
4	420	424	KRRRV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06910.1	3e-12	MYB_related family protein