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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu057060.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | LBD | ||||||||
Protein Properties | Length: 160aa MW: 17445.6 Da PI: 6.4969 | ||||||||
Description | LBD family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF260 | 137.9 | 3.4e-43 | 10 | 108 | 1 | 99 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 +CaaCk+lrrkC ++C +apyfp e+p kfanvhk+FGasnv+kll+++p+++reda++sl+yeAear++dPvyG+vg i+ lq+q+ +l++el++++ Oeu057060.1 10 PCAACKFLRRKCLPSCSFAPYFPPEEPTKFANVHKIFGASNVSKLLNEIPPHQREDAVNSLAYEAEARLKDPVYGCVGAISVLQRQVLHLQKELDATN 107 7*********************************************************************************************9987 PP DUF260 99 e 99 + Oeu057060.1 108 A 108 6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 160 aa Download sequence |
MASSSYSNPP CAACKFLRRK CLPSCSFAPY FPPEEPTKFA NVHKIFGASN VSKLLNEIPP 60 HQREDAVNSL AYEAEARLKD PVYGCVGAIS VLQRQVLHLQ KELDATNADL MLYANNDAAH 120 SYQVTSNSTL YNGEESNPGL ILPYASPWNN SSSNDSKSM* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G27650.1 | 1e-69 | LBD family protein |