PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu057044.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 520aa    MW: 57902.5 Da    PI: 5.0638
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu057044.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS426.52.1e-1301495191374
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  l+++L+ecAeavs+gdl+ a+al+  l+ ++s +g+p++Rl ay++e+L+arl++s+s +yk+l++ e +   sse +++++++++++P++kf+++ a
  Oeu057044.1 149 LKQVLIECAEAVSEGDLSTAEALMDILERRVSVSGEPIERLGAYMVEGLRARLLSSGSIIYKKLKCIEIT---SSELISYMQVLYHACPYYKFAYMSA 243
                  5799*****************************************************************9...9************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledleleeL 194
                  N  I ea+e+e+r+HiiDf+i qG QW+ L+qaLa Rp+gpp +RiTgv++++s   +   le +ge Lak+A+++gv+fef++ +  +  +++le+L
  Oeu057044.1 244 NVVIGEAMENENRIHIIDFQIAQGSQWVFLIQALARRPGGPPYIRITGVDDSQSAhaRGGGLELVGETLAKVAKSCGVQFEFHA-AGMSGCEVQLENL 340
                  ***************************************************9988889999***********************.889999******* PP

         GRAS 195 rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgr 292
                  ++++gEalaVn+ ++lh+++desvs+ ++rd++L+lvkslsPkvv++veqe+++n+++F+ rf+e+l+yy+a+f+s+++  pre+++ri+ E+++++r
  Oeu057044.1 341 QIRHGEALAVNFPYMLHHMPDESVSTMNHRDRLLRLVKSLSPKVVTLVEQESNTNTAPFFPRFCETLNYYTAMFESIDEARPREDKQRINAEEHCVAR 438
                  *****************************************************************************9999***************** PP

         GRAS 293 eivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  ++vn++ace +er+erhe ++kWr rl++aGF+p+pls+++ + ++ +l++++ + y++ e++g+l+lgWk+r++ + SaWr
  Oeu057044.1 439 DVVNIIACEDTERVERHELFGKWRLRLMMAGFSPIPLSQSVSTAIRDMLNEYS-RNYSIAESNGALYLGWKNRAMATSSAWR 519
                  *****************************************************.55*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 520 aa     Download sequence    
MAYCFSPLQV LNSNSSGNRI SEGTEVSVQN CTEQFFTLES TPATDFVIYN SPSALSVASN  60
RSPFSPQCSQ SYVSDIHHSS DNNYGSPLSG YSGVDDNSKL MHALMVLRNE LLGPESDMDD  120
SCSFYGVPSQ TSTFNKFDRI LEMAPSMDLK QVLIECAEAV SEGDLSTAEA LMDILERRVS  180
VSGEPIERLG AYMVEGLRAR LLSSGSIIYK KLKCIEITSS ELISYMQVLY HACPYYKFAY  240
MSANVVIGEA MENENRIHII DFQIAQGSQW VFLIQALARR PGGPPYIRIT GVDDSQSAHA  300
RGGGLELVGE TLAKVAKSCG VQFEFHAAGM SGCEVQLENL QIRHGEALAV NFPYMLHHMP  360
DESVSTMNHR DRLLRLVKSL SPKVVTLVEQ ESNTNTAPFF PRFCETLNYY TAMFESIDEA  420
RPREDKQRIN AEEHCVARDV VNIIACEDTE RVERHELFGK WRLRLMMAGF SPIPLSQSVS  480
TAIRDMLNEY SRNYSIAESN GALYLGWKNR AMATSSAWR*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17230.10.0GRAS family protein