PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu056501.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HD-ZIP | ||||||||
Protein Properties | Length: 219aa MW: 24526.6 Da PI: 10.3497 | ||||||||
Description | HD-ZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 58.1 | 1.5e-18 | 72 | 126 | 2 | 56 |
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq+ Le+ F+++ ++++ +++ LA++l+L+ rqV vWFqNrRa+ k Oeu056501.1 72 RKKLRLSKEQIFLLEDTFKQHTTLNTVQKQTLAERLNLKPRQVEVWFQNRRARTK 126 678899***********************************************98 PP | |||||||
2 | HD-ZIP_I/II | 112.2 | 3.3e-36 | 72 | 163 | 1 | 92 |
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 +kk+rlskeq+ lLE++F+++++L++ +K++la++L+l+prqv+vWFqnrRARtk+kq+E+dye+Lk+++++l+een+rL+ke eL++++k Oeu056501.1 72 RKKLRLSKEQIFLLEDTFKQHTTLNTVQKQTLAERLNLKPRQVEVWFQNRRARTKLKQTEVDYEFLKKHFQRLSEENRRLNKELVELQSAVK 163 69**************************************************************************************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 219 aa Download sequence |
MPKRDHDRKN KRVFFLDLSI PLHSSNHAIE GSGSGFGSGS SSLKVNFEDD KQASKDSVSN 60 GSKEDEDRNY GRKKLRLSKE QIFLLEDTFK QHTTLNTVQK QTLAERLNLK PRQVEVWFQN 120 RRARTKLKQT EVDYEFLKKH FQRLSEENRR LNKELVELQS AVKMEQTPST PLPFFIQVPK 180 AAATLTMCPS CEKVSKSRGG DGGKAGGGSG HTGGGPYT* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 121 | 129 | RRARTKLKQ |
2 | 202 | 208 | GGKAGGG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06710.1 | 3e-49 | HD-ZIP family protein |