PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu056236.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | HSF | ||||||||
Protein Properties | Length: 338aa MW: 37313.2 Da PI: 4.6488 | ||||||||
Description | HSF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HSF_DNA-bind | 114.4 | 7.1e-36 | 21 | 111 | 2 | 101 |
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellekik 98 Fl+k+y++++d++++++isw+e+g++fvv++++efa+++LpkyFkh+nf+SFvRQLn+YgF+kv ++ weF+++ F++++k ll++i+ Oeu056236.1 21 FLTKTYQLVDDHTNDDVISWNEDGSTFVVWNPTEFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDR---------WEFSNECFRRDEKMLLCDIQ 108 9*****************************************************************99.........******************** PP XXX CS HSF_DNA-bind 99 rkk 101 r+k Oeu056236.1 109 RRK 111 *98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 338 aa Download sequence |
MTPPPEGRNA GDSARTLPTP FLTKTYQLVD DHTNDDVISW NEDGSTFVVW NPTEFARDLL 60 PKYFKHNNFS SFVRQLNTYG FRKVVPDRWE FSNECFRRDE KMLLCDIQRR KIATLSSAVA 120 ATSLAAVTVA AAHPTPATTQ LRTESPSDSG EEQVLSSSNS AGAVLEFSGS TSELIGENER 180 LRKENMQLNK DLSDVKNLCN KIYHLMSNFS NCSSSNDQAA KPPDLLPSTG FCEEMEGVVT 240 ASAAPDGGEV NDIRSNAERL SARLIGMPMG VKRGREFDGT SADHDMDLQL QLQQPGTDVK 300 SELSDQNIGD DPETTWLRRC NSRNQGYFNM NGADHES* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G62020.1 | 3e-76 | HSF family protein |