PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu056176.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 223aa MW: 25355 Da PI: 8.6077

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu056176.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	24.2	6.1e-08	78	127	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 h e Er+RR+++ ++ Lr+llP ++K + +A +YIk++ Oeu056176.1 78 IPHREFERQRRKQMAMLYASLRSLLPLeY---IKGKRAVCDHMNEALNYIKDM 127 5699*********************77...99**************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 223 aa Download sequence
MFPSQSQDDP IFEDPSIFLE DIVNLEEYLI ADHQDSSVLT RNRNRANPKD TKKRQIKPSS 60 DDEENKEGVS AENKGKKIPH REFERQRRKQ MAMLYASLRS LLPLEYIKGK RAVCDHMNEA 120 LNYIKDMRKN IQELSLCRDK LKKLYTSGSN SKLTPNSVTV SPCQDGVEVL IRTSSIEGGF 180 PLSRVLGELI RTNLKVATAT VLMCIDLSAL RERLFNVINI EN*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	139	144	DKLKKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G51790.1	7e-35	bHLH family protein