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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu055576.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | MYB_related | ||||||||
Protein Properties | Length: 88aa MW: 9706.73 Da PI: 5.8581 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 32.4 | 2.2e-10 | 12 | 56 | 2 | 44 |
SSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrw 44 g WT++E + + +a + + + +W+++ar +g +t++++k ++ Oeu055576.1 12 GTWTAQENKEFEKALAVYDANtpdRWAKVARAVG-EKTPEEVKRHY 56 79********************************.9*********9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence |
MASSSISSYA SGTWTAQENK EFEKALAVYD ANTPDRWAKV ARAVGEKTPE EVKRHYEILV 60 EDVTYIESGQ VPYPYCRNSR AACNRGG* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G39250.1 | 1e-28 | MYB_related family protein |