PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu055103.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 329aa    MW: 37379.7 Da    PI: 9.7638
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu055103.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding48.91.5e-151562148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT +Ed++l+ +++++G g+W+  + + g+ R++k+c++rw +yl
      Oeu055103.1 15 KGPWTRDEDQKLLAYIERHGLGRWRDLPTKAGLQRCGKSCRLRWTNYL 62
                     79********************************************97 PP
2Myb_DNA-binding53.17.4e-1768111146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ +E++++++++++lG++ W++Ia +++ +Rt++++k++w++
      Oeu055103.1  68 RGKFSLQEEKRIIQLHALLGNR-WSAIATHLP-KRTDNEIKNYWNT 111
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 329 aa     Download sequence    
MGISSTSLEK VQMKKGPWTR DEDQKLLAYI ERHGLGRWRD LPTKAGLQRC GKSCRLRWTN  60
YLRPDIKRGK FSLQEEKRII QLHALLGNRW SAIATHLPKR TDNEIKNYWN TRLKKRLSRM  120
GIDPVTHKPK NQPGTNSAQS KNAANLSHMA QWESARLEAE ARFLHQSKLV SNPYLFRLHH  180
IATSLPRLAP PPPPPPPPPC LDILKVWQGT CKSFFTPTVT LESPTSTLNF SSNMLPVEET  240
HQSIPNIFVP STNITPVENS SALCGYEKHH NSFETNDIME NPMQLMGNYN HIDLPISANY  300
NIVAGPEGFE EIKDYWNDIL NSVNSPVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15310.18e-94MYB family protein