PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054878.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family ZF-HD
Protein Properties Length: 275aa    MW: 30608.3 Da    PI: 7.312
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054878.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer109.71.6e-3451107358
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegee.gtaaalkCaACgCHRnFHRreve 58 
                   v+YkeClkNhAaslGgha+DGCgEfmps++++ +++++lkCaACgCHRnFHRre +
  Oeu054878.1  51 VVTYKECLKNHAASLGGHAMDGCGEFMPSPSATtADPTSLKCAACGCHRNFHRRELN 107
                  589**************************9999899******************976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDFYPNPTTT KSPDDSGFDT PPHTQPIEPF LSFTNGAIKK NHHHSLPPVV VVTYKECLKN  60
HAASLGGHAM DGCGEFMPSP SATTADPTSL KCAACGCHRN FHRRELNDPS PTSIIPPLFD  120
FRHPPPPRRP SSSPSPTQPT NMLLALSMAV PEDNYQAPAI PIEFKTENQT GRKRFRTKFS  180
QEQKEKMHSF AEKLGWKLQK CDESTVEEFC NEIGVSRGVL KVWMHNNKST FARKEINNGR  240
IITFENNGLK INGGSSSSNN ENREEEQMKD DLDA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15210.12e-68ZF-HD family protein