PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054863.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 416aa    MW: 45961.5 Da    PI: 6.2424
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054863.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.7e-16122167147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l+++v+++G+ +W++Ia+++  gR++k+c++rw++ 
      Oeu054863.2 122 RGHWRPAEDSKLKELVALYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 167
                      899*****************************.***********996 PP
2Myb_DNA-binding55.51.4e-17174217146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T eE+e+l  a++++G++ W+ Iar ++ gRt++ +k++w+ 
      Oeu054863.2 174 RRAFTDEEEERLMAAHRLYGNK-WSMIARLFP-GRTDNAVKNHWHV 217
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    
MANKFVIYPP NSTNGNSFTC HLTPPPCSLG SSSMVGMVFA DLSSLSINPI PSSQEGSFCD  60
TDMDEGRHNN MWGKASNSSD VFGENNESID LNASLNEEDE MNMHALSSGK DTNTGQSKLC  120
ARGHWRPAED SKLKELVALY GPQNWNLIAE KLEGRSGKSC RLRWFNQLDP RINRRAFTDE  180
EEERLMAAHR LYGNKWSMIA RLFPGRTDNA VKNHWHVIMA RKYREQSSAF RRRKMGQFVC  240
KRSMEDDLPL FNTEAAFKTQ STMPSYCVNP NRTFGDLTAP CQFLTRNGDC GGGGGGATSS  300
QIYSIPPYSG FWAPQTSLGL FPGPITSEMM PILDPGKSCD GPMVERNILL SYPHYPSSLM  360
TAMLQSNYQY PSDFTAPPHQ VSVTENTASS STLTEERNGE TIATPFIDFL GVGAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.13e-76MYB family protein