PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054856.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 338aa    MW: 38135.3 Da    PI: 8.969
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054856.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding46.67.8e-151461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+ +++++G g Wk+ + + g+ R+ k+c+ rw +yl
      Oeu054856.1 14 KGPWTAEEDQKLLTYIEEHGRGGWKALPTKAGLQRCCKSCRFRWTNYL 61
                     79********************************************97 PP
2Myb_DNA-binding538.1e-1767110146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+++ +Ed+ +++++++lG++ W++Ia +++ +Rt++++k++w++
      Oeu054856.1  67 RGNFSLQEDQTIIQLHALLGNR-WSAIATHLP-NRTDNEIKNYWNT 110
                      89********************.*********.***********97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MARSSCCKKI GLRKGPWTAE EDQKLLTYIE EHGRGGWKAL PTKAGLQRCC KSCRFRWTNY  60
LRPDIKRGNF SLQEDQTIIQ LHALLGNRWS AIATHLPNRT DNEIKNYWNT NIKKRLTKMG  120
IDPVTHKLKT HELCTKQSKY TAYISHMAQW ESARLEAEVR SIRESKLVSN AYHSQLQLLH  180
KVTVPPPLAP PQPPRPPMCL DIPKVWQGEW AKPAKDMNTI FNGVSSTLNF SSHNKFGTIP  240
TTVGFNDNSS MIPINYVENS VHTTKGRITD PIDDSNYNTD SLSVPSFMDS FTALLSNMDV  300
VTTDNVVESY YGSSEEDKNY GNIELNSMAL PSGSHVF*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01140.18e-92MYB family protein