PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054343.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 340aa    MW: 37776 Da    PI: 9.763
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054343.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding41.63e-1369113147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      r +WT++E++++++a +++  + Wk+I + +g  +t  q++s+ qky
      Oeu054343.1  69 RESWTEQEHDKFLEALQLFDRE-WKKIEAFVG-SKTVIQIRSHAQKY 113
                      789*****************99.*********.*************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MVSVCRNPVR GQDFCYYNYM DGEPMKTGTM AMRNADNNLL IVAESGNAGA GVEDQNKKVR  60
KPYTITKSRE SWTEQEHDKF LEALQLFDRE WKKIEAFVGS KTVIQIRSHA QKYFLKAQKN  120
GTSEHVPPPR PKRKAAHPYP QKAPKKVVSQ ATGSLQSSAS LLEPGYVVRP DQLSVPGNTI  180
DRAALSPWTY NVVPAGSMSH MSRDDMGLAS LAVTRKCSRG SNESTPQLLP SNESNSQVKE  240
KQGPPTKVMP DFAKVYSFIG SVFDPNASDH LERLKKMDQI NVATAVMLMK NLSINLMSPE  300
FENHRKMLSS HSVGIEEDRF DSPFKNLQVD KLGNVITTA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52660.28e-86MYB_related family protein