PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu054196.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 510aa    MW: 56975.6 Da    PI: 5.1523
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu054196.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS344.22.2e-1051275073374
         GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshltaNq 100
                  + Lle A+a+++++ +++q+l++ l+el sp+gd  qRla+yf++AL +r+++s+++++++l + ++++ + +++ +++  f+evsP+  f+h++ N 
  Oeu054196.1 127 DILLETAKAIAHRNSARVQQLMWMLNELGSPYGDIDQRLASYFLQALFSRMTDSGDRTCRTLISASQKNCSFESTRKMVLKFQEVSPWTMFGHVASNG 224
                  679*********************************************************996666654443333344445***************** PP

         GRAS 101 aIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg........skeeleetgerLakfAeelgvpfefnvlvak.rledl 189
                  aIlea++ge+++HiiD++ ++++QWp+Ll+aLa+R++++p+lR+T+v++ + g         ++ ++e+g+r++kfA+ +gvpf+fnv+++  +l++l
  Oeu054196.1 225 AILEALDGETKLHIIDISNTYCTQWPTLLEALATRTDETPHLRLTTVVAGKGGdttggtaaVQKVMKEIGSRMEKFARLMGVPFKFNVIHHAgDLSEL 322
                  ***********************************************99766688999999999*************************7777***** PP

         GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnse....sFlerflealeyysalfdsleaklpreseeri 283
                  +l e++++++Eala+n+v +l ++     ++ ++rd +++++++lsP++v+v+e+ead++ +    +F+++f e+l+++ + f+sl++++p++s+er 
  Oeu054196.1 323 NLAEIDIREDEALAINCVGALRTVT----TIGNRRDVLMSMFRRLSPRIVTVIEEEADLDIGadglEFVRGFEECLRWFRVYFESLDESFPKTSNERL 416
                  **********************997....999999*********************98843334569******************************* PP

         GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrve..eesgslvlgWkdrpLvsvSaWr 374
                  ++Er+  gr++v++vac+ ae++er et+++W++rl++ G++pv++s+++ +++++llr++  +g+++   ++s+ ++l Wkd+p+v++SaWr
  Oeu054196.1 417 MLERA-AGRAVVDLVACSPAESIERWETAARWSNRLHAGGYSPVSFSDEVCDDVRALLRRYR-EGWSMAqsSDSAGIFLSWKDQPVVWASAWR 507
                  *****.********************************************************.665555226678889**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 510 aa     Download sequence    
MDTLFRLVSL QSDQSLNYSS RTSSSSRSSR QNPYLQDQEE GCFNVFMDEE DFSSSSSRHY  60
HPFQQQQTSN TPTPTTTNTS GGAATPTHHH LSSYDQSADQ FSSSLENDIS LEFASSFSGN  120
NSKWASDILL ETAKAIAHRN SARVQQLMWM LNELGSPYGD IDQRLASYFL QALFSRMTDS  180
GDRTCRTLIS ASQKNCSFES TRKMVLKFQE VSPWTMFGHV ASNGAILEAL DGETKLHIID  240
ISNTYCTQWP TLLEALATRT DETPHLRLTT VVAGKGGDTT GGTAAVQKVM KEIGSRMEKF  300
ARLMGVPFKF NVIHHAGDLS ELNLAEIDIR EDEALAINCV GALRTVTTIG NRRDVLMSMF  360
RRLSPRIVTV IEEEADLDIG ADGLEFVRGF EECLRWFRVY FESLDESFPK TSNERLMLER  420
AAGRAVVDLV ACSPAESIER WETAARWSNR LHAGGYSPVS FSDEVCDDVR ALLRRYREGW  480
SMAQSSDSAG IFLSWKDQPV VWASAWRPV*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.10.0GRAS family protein