PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu053003.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 552aa    MW: 61619.3 Da    PI: 5.0877
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu053003.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS282.51.2e-861935502374
         GRAS   2 velLlecAeavssgdlelaqalLarlsel.aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlta 98 
                  v+ L++ Ae++++++l+  q++Larl+++ +sp g+p qR+a+yf+eAL++  ++    l ++ +p +ts  + +++++a+k+fs +sPi+ fs +ta
  Oeu053003.2 193 VNDLIRLAECFDTNSLQIGQTILARLNQTlRSPIGKPPQRAAFYFKEALQSLFTG----LTQTTHPASTS--EIIQTIKAQKTFSSISPIPMFSSFTA 284
                  678*************************99************************9....55555454444..69************************ PP

         GRAS  99 NqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp....egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledlele 192
                  Nqa+lea++g+++v +iDfdi+ G+QW++++++Las++      pp lRiT+++++e   ++e + + e+L++fA+el+++f+++++  +++  l+++
  Oeu053003.2 285 NQALLEATDGCTHVQVIDFDIGLGGQWASFMKELASKAdsrkMTPPVLRITAIVPEE--YATESRLITENLTQFARELNIKFDIDFVSIRSFGYLSFR 380
                  ***********************************9885544669**********66..9999************************99********* PP

         GRAS 193 eLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpres..eerikvE 286
                  ++++  gE++aV l+ ++++            + +L+ ++++ P+vvv+v++e ++  +++s+ + ++  le+y+ l++sle+   +++  ++++ +E
  Oeu053003.2 381 AIKFMDGEKIAVLLSPAIFQQI---------GTGFLNDLRHVPPHVVVHVHSEGQMgfGTSSYRQTVIGGLEFYTGLLESLETANVNDDgsDWMRRIE 469
                  ****************999887.........368*******************777669**********************665444444699***** PP

         GRAS 287 rellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                   +++ ++i ++  ++g +          Wre+l ++G+++v  s++ + qa++llr+++++g++v +++++++l+W+dr L+++SaW+
  Oeu053003.2 470 TFVFFPKILKAMEAAGHQ-------GPPWREALVAVGLRQVGPSHFSYLQAECLLRRMQVRGFHVAKHQEEMLLYWHDRLLFATSAWK 550
                  ************999998.......89************************************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 552 aa     Download sequence    
MKVPFSANNQ SDQTVSSKPS NCTVNTTPNT NLQDVTTPTS SPYEPKSVLE IQGSPSPVAD  60
KKPASDTDNS IVLDDPFQLE DHVLSHQFDD LDSFMREFGL NDDSSPVSKP IYQHSINGEP  120
QTLTQYPSLQ EFPPISLFDS TQFVPSDFGL FSDISTYNTA SLSHNTNIVN TFDVSTDIQS  180
FNNNDWNVGF NYVNDLIRLA ECFDTNSLQI GQTILARLNQ TLRSPIGKPP QRAAFYFKEA  240
LQSLFTGLTQ TTHPASTSEI IQTIKAQKTF SSISPIPMFS SFTANQALLE ATDGCTHVQV  300
IDFDIGLGGQ WASFMKELAS KADSRKMTPP VLRITAIVPE EYATESRLIT ENLTQFAREL  360
NIKFDIDFVS IRSFGYLSFR AIKFMDGEKI AVLLSPAIFQ QIGTGFLNDL RHVPPHVVVH  420
VHSEGQMGFG TSSYRQTVIG GLEFYTGLLE SLETANVNDD GSDWMRRIET FVFFPKILKA  480
MEAAGHQGPP WREALVAVGL RQVGPSHFSY LQAECLLRRM QVRGFHVAKH QEEMLLYWHD  540
RLLFATSAWK Y*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36710.11e-110GRAS family protein