PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052769.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 267aa    MW: 30240.8 Da    PI: 9.1409
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052769.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding55.11.8e-174691147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
                     rg W + Ed +l+++v+q+G+ +W++Ia++++ gR++k+c++rw++ 
      Oeu052769.1 46 RGHWRPHEDAKLKELVAQFGPQNWNLIAEKLQ-GRSGKSCRLRWFNQ 91
                     899*****************************.***********996 PP
2Myb_DNA-binding52.41.2e-1698141146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++T eE+e l+ a++++G++ W++Ia+ +  gRt++ +k++w+ 
      Oeu052769.1  98 RSAFTDEEEEALLAAHRMYGNK-WSLIAKLFL-GRTDNAVKNHWHV 141
                      789*******************.********9.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    
MEFQYLNAPT EQNQRRAEGR VNKKKIYRTE DEEIWRKRSH TKLCARGHWR PHEDAKLKEL  60
VAQFGPQNWN LIAEKLQGRS GKSCRLRWFN QLDPRINRSA FTDEEEEALL AAHRMYGNKW  120
SLIAKLFLGR TDNAVKNHWH VIMARKYKEQ NSTYRRKSNF SPEGFPMTDL QICNASSATT  180
VSSNNLLESQ IGLNEEGKVG KGPMANGVLV DQSGHSDSNS HSEVSASESV ANNRANLCMS  240
GQEDYQNGKL HESNLAFIDF LGVGAT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69560.14e-68MYB family protein