PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu052485.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family C2H2
Protein Properties Length: 287aa    MW: 32671.4 Da    PI: 8.8125
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu052485.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H216.91.8e-056283223
                 EETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2  2 kCpdCgksFsrksnLkrHirtH 23
                  C++C+k +  +s++k H++t+
  Oeu052485.1 62 ICHKCSKGYAVQSDFKAHLKTC 83
                 7*******************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    
MHRRSHKVPW KLLKRDTPMV KKRVFVCPEP SCLHHDPCHA LGDLVGIKKH FRRKHCNHKQ  60
WICHKCSKGY AVQSDFKAHL KTCGTRGHSC DCGRVFSRVE SFIEHQDACS IGRLLPESRT  120
LQPTACLSQR PSTDVNFLSN VGYKNSWPGL SLDLQLSAKS SVSNWTKVAG QDHSTQLQLS  180
IGSSEINEQN EMDSREDEQL RMAMTENAYA QEARQLAKRQ IEMAEKEFAN AKRIMHLARA  240
ELEKAQALKQ HATMQINDIV LEITCHSCRH KLQNERGVIE TCFTQC*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01940.28e-97C2H2 family protein