PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051837.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YB
Protein Properties Length: 145aa    MW: 16044.2 Da    PI: 9.2461
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051837.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB161.61.2e-50398297
        NF-YB  2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
                  +qd++lPianv+rimk++lP nakisk+aket+qecvsefisfv+seasdkc++e+rkt+ngdd++wal+tlGf+++ e ++ yl+k+re+e++k
  Oeu051837.1  3 DKQDKLLPIANVGRIMKRILPRNAKISKEAKETMQECVSEFISFVSSEASDKCNKENRKTVNGDDICWALSTLGFDNFSEVMSSYLHKFREFERQK 98
                 579******************************************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 145 aa     Download sequence    
MVDKQDKLLP IANVGRIMKR ILPRNAKISK EAKETMQECV SEFISFVSSE ASDKCNKENR  60
KTVNGDDICW ALSTLGFDNF SEVMSSYLHK FREFERQKAE QKKASSSEEK DGVNSNGFGL  120
KPKSSALLEF GILEKGGSSS AKPK*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09030.16e-55NF-YB family protein