PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051298.2
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB_related
Protein Properties Length: 310aa    MW: 34369.8 Da    PI: 7.5021
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051298.2genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.21.4e-11556147
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmg.....kgRtlkqcksrwqky 47
                     +++WT eE+e l  +v+++G g Wk I r          R+  ++k++w+++
      Oeu051298.2  5 KQKWTSEEEEALRAGVAKHGAGKWKNIQRDPEfnhllFARSNIDLKDKWRNL 56
                     79*****************************99999977***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 310 aa     Download sequence    
MGNPKQKWTS EEEEALRAGV AKHGAGKWKN IQRDPEFNHL LFARSNIDLK DKWRNLSVAN  60
GQGSREKSKT PKAKGNPAES PATPLPNVQT PASATPLSQD ASMDVIMLDS SKPFPEGNNA  120
SKAIWFVKSL PNSSESMPLD ALSECKHYSC RVRYNSMIYE ALSTLKEPNG SDSSALANFI  180
EQRHEVPQNF KKLLSSRLRR LVQQDKLEKI QNCYRIKRDS LADTKTLTTV QKDFWPQSRS  240
IGYLGDTVEE AAVEAAYKIA EAENKSFVAA EAVKEAERVS GMAEDMNSLL QFALDVFEQS  300
LSGEILLMA*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G17520.13e-46MYB_related family protein