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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu051254.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | ERF | ||||||||
Protein Properties | Length: 222aa MW: 24928.3 Da PI: 6.5141 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.4 | 1.8e-18 | 39 | 88 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +kGVr++ +g+WvAeIr+p ng r++lg++++ +eAa a++aa++kl+g Oeu051254.1 39 TFKGVRQRT-WGKWVAEIREP--NG-GMRVWLGTYDSSYEAALAYDAAARKLFG 88 69****999.**********9..33.5*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 222 aa Download sequence |
MMKSMMALEG QKVRKPALQA SSRKGCMRGK GGPENALCTF KGVRQRTWGK WVAEIREPNG 60 GMRVWLGTYD SSYEAALAYD AAARKLFGPD AKVNLPHLYE ENPISQFPVS SNIGISHVQI 120 QENIPVIAFS KCAPLPIFHD NADAYRCGYP FEGTSLINNS QNVNEIEFVS VKGMLKDLNL 180 PEIDDSSMWA EAAKDTSFQF VEDMDLDHRN NWNNVRFQWF L* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 4e-38 | ERF family protein |