PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu051244.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family MYB
Protein Properties Length: 279aa    MW: 32259 Da    PI: 10.4287
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu051244.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding25.62.9e-084893447
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     WT eE +++  a+  +  +   +W+++a++++ g++  ++++ ++k+
      Oeu051244.1 48 WTREENKKFELAIVIYDEKtpyRWHKVASMIP-GKSVIDVINQYRKL 93
                     ********************************.************97 PP
2Myb_DNA-binding40.75.4e-13144188347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + +++G+g+W+ I+r +   +t+ q+ s+ qky
      Oeu051244.1 144 PWTEEEHRRFLLGLERHGKGDWRNISRNFVFSKTPTQVASHAQKY 188
                      8*****************************778***********9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MIFFRGSEKE SLFYILQYKP FGKKISDKSI QLSNCSVLRL KQRKSTMWTR EENKKFELAI  60
VIYDEKTPYR WHKVASMIPG KSVIDVINQY RKLVADITNI EAGLVPIPGY LAAAFTLKLG  120
ENRDFDAFRK RGRSCDQERK KGVPWTEEEH RRFLLGLERH GKGDWRNISR NFVFSKTPTQ  180
VASHAQKYFL RQLTEGKDKR RPSIHDMTTP HLTRTTTMTT WSESVDKKLD STATPKKLLN  240
WNNKNDGALT ILDSIAYPQD IARFHGRAGS NICSLYYS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1129141RKRGRSCDQERKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G05790.12e-74MYB family protein