PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050883.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 324aa    MW: 36418 Da    PI: 4.6103
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050883.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.71.4e-102452851055
                  HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  r+RR+riN+++  L+ ++P+      +K++ +++Le+Av+Y+k Lq
  Oeu050883.1 245 RKRRERINERLKILQNIVPNG-----TKVDISTMLEEAVHYVKFLQ 285
                  9******************97.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MEPVGTFLDE EWESLSRMFS SEDSDFMLHF HLFSNQVING LSFLTQTEEN VAAGVEDSVF  60
FPSDTLDSTT NFFYVSQESS NSSTEIDNVL FPGQEFFSNF PDRVISDTYD NCSDNHVMED  120
KLGSGKIGNA DIDDSGKTMQ FKRKSDTPEQ NMEENSSESP KKKYRVSRDA SRMVQSKKNK  180
KVTRNSNDAL EETNGRGSGL SSNSCNPEDD FNGSQESKGS GSLNSTEKTR ASRGSATDPQ  240
SLYARKRRER INERLKILQN IVPNGTKVDI STMLEEAVHY VKFLQHQIKL LSSDDLWMYA  300
PIAYNGMDIG LYQKISPTLW PQN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G33880.12e-54bHLH family protein