PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu050621.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family bHLH
Protein Properties Length: 290aa    MW: 31880.5 Da    PI: 7.1135
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu050621.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.00011972351255
                  HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  R +++ +++  L +++ +      +K + a++L++A+ YI+ Lq
  Oeu050621.1 197 RKEKLGDRITALHQIVSPF-----GKTDTASVLTEAIGYIRFLQ 235
                  6677888999999999987.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MMAGNPNWWS VNGMHPQSRH LSSSSPFLYV SSSSSSASLD SSTANPSQEF PVRSWSQLLL  60
SGLAGTEEDE KFGNSLFQQQ KKMENWEVQV LNPSFSIPVV DVKQETAQTN QLYGNVEDEF  120
QASRSSCWPQ VIPESSPTSS ITSVSNNILN FSGAKMDYDR KNQHLDHSSE CNSTSIGGVS  180
KKPKVQQSSS QPALKVRKEK LGDRITALHQ IVSPFGKTDT ASVLTEAIGY IRFLQGQIEA  240
LSSPYMRNAS RSMGHQQSVQ ERDCLSPEES GQVCFIGSLT FLKRGFKLN*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.19e-38bHLH family protein