PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu050337.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | bHLH | ||||||||
Protein Properties | Length: 155aa MW: 16924.4 Da PI: 9.674 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 15.3 | 3.6e-05 | 40 | 72 | 17 | 54 |
HHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 17 NsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++++ L++l+ + +K + a++L +A+eYI+ L Oeu050337.1 40 GERISALQQLVSPY-----GKTDTASVLLEAMEYIRFL 72 57899999999998.....9****************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 155 aa Download sequence |
MMEHKRNSVS LDQSSLMGLK KKIQKIDAPL SSKEKKEKVG ERISALQQLV SPYGKTDTAS 60 VLLEAMEYIR FLHEQVKVLS APYLSSTPTT NTQVSIKLEV EQHNLKSKGL CLVPISFTDG 120 VASSNGADIW APIKSSSPNS RRSISDDVSV ITYS* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G05710.3 | 5e-54 | bHLH family protein |