PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu050163.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

CO-like

Protein Properties

Length: 397aa MW: 45003.6 Da PI: 5.1121

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu050163.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	27	9.1e-09	17	59	4	40
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......Htvv 40 + C+ + ++++++fC ++ +lC+ C + H+ H++v Oeu050163.1 17 KACDSCLRQRARWFCAADDAYLCQGCDASVHSAnrlairHERV 59 68*****************************657888888876 PP
2	CCT	62.1	1.8e-21	347	389	1	43
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkq 43 R+a ++RY+eKr++R+F+KkirYe+RK +A++RpR+KGrFvk+ Oeu050163.1 347 RRAIVSRYREKRRKRLFSKKIRYEVRKLNADKRPRMKGRFVKR 389 88999************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 397 aa Download sequence
MNTERKTASI LGGKTAKACD SCLRQRARWF CAADDAYLCQ GCDASVHSAN RLAIRHERVR 60 LESSSCKGKG NDDSGPAWYR GFTRKARTPR QAKSSPAQPS LLVPEINSED TSLVENEDQL 120 LYRVPVFDPF DAEVFTASNR TEDELVDVLL DDEKGFDLDI NPEFITSDAE LAEFAADVES 180 LLGTGIEEDS HEIELGLARM DCKQEDIIDV RFEEKRVKFE DDDDEMKAVI ACHLDPALDM 240 ARRTFNWNSD YASPLLHGEA DEDKKVIGTV TKMIDCQSEE EVSRKMFLRL DHEAVIAAWA 300 SQGSPWTNGI RPEFFNLNDF LDTFPWGGSL IPYEGLRGRL GDSDAGRRAI VSRYREKRRK 360 RLFSKKIRYE VRKLNADKRP RMKGRFVKRT IFLPNA*

Sequence ? help Back to Top

Protein Sequence Length: 397 aa Download sequence

MNTERKTASI LGGKTAKACD SCLRQRARWF CAADDAYLCQ GCDASVHSAN RLAIRHERVR  60
LESSSCKGKG NDDSGPAWYR GFTRKARTPR QAKSSPAQPS LLVPEINSED TSLVENEDQL  120
LYRVPVFDPF DAEVFTASNR TEDELVDVLL DDEKGFDLDI NPEFITSDAE LAEFAADVES  180
LLGTGIEEDS HEIELGLARM DCKQEDIIDV RFEEKRVKFE DDDDEMKAVI ACHLDPALDM  240
ARRTFNWNSD YASPLLHGEA DEDKKVIGTV TKMIDCQSEE EVSRKMFLRL DHEAVIAAWA  300
SQGSPWTNGI RPEFFNLNDF LDTFPWGGSL IPYEGLRGRL GDSDAGRRAI VSRYREKRRK  360
RLFSKKIRYE VRKLNADKRP RMKGRFVKRT IFLPNA*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	358	374	RRKRLFSKKIRYEVRKL
2	359	375	RRKRLFSKKIRYEVRKL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68520.1	5e-80	CO-like family protein