PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049644.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GATA
Protein Properties Length: 301aa    MW: 32787.1 Da    PI: 6.996
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049644.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.61.1e-15223259135
         GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                  C++Cg  +  Tp++Rrgp g++tLCnaCGl+++ kg+
  Oeu049644.1 223 CRHCGINEksTPMMRRGPHGPRTLCNACGLMWANKGT 259
                  ****998889************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDGMHASQAR MIGHYMQEQD HQHHHHPGLH HHMSNGNVLD HDEHGHDSGG GESEGMDGEV  60
SADPGNLSDN HGALVSQGGG TEDNNQLTLS FQGQVYVFDS VSPEKVQAVL LLLGGREVPP  120
NIPTVSVSTH NSGGLSSTPQ KFNVPQRLAS LIRFREKRKE RNFEKKIRYT VRKEVALRMQ  180
RNKGQFTSSK PSQDDSASAV SSWESNQNWG ADGTSSQIQE ISCRHCGINE KSTPMMRRGP  240
HGPRTLCNAC GLMWANKGTL RDLSKAAAVG TNTPRNRSDE NGNLEAEQMV LRAAANGDDL  300
*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.26e-95GATA family protein