PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu049500.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 298aa    MW: 33054.6 Da    PI: 10.0116
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu049500.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA100.91.2e-31137193158
    CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                  +ep+YVNaKQy++Il+RRq Rak+e ekk  +k rkpylheSRhkhA+rR+RgsgGrF
  Oeu049500.1 137 EEPVYVNAKQYHGILRRRQIRAKAELEKKA-IKVRKPYLHESRHKHAMRRARGSGGRF 193
                  69***************************9.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MPTLAKNNDR KLETGVQNFQ SPTPYTRSWG GMPRTEKQAD KSITSRTSQP QGNDEGSVKE  60
TEINAPHSGS NGSSRQEQQQ QFDNNSQMEL VGHSIMLTPY QYTDPQYGGI VTYGAPVQQQ  120
FLGYLPARMP LPLNMEEEPV YVNAKQYHGI LRRRQIRAKA ELEKKAIKVR KPYLHESRHK  180
HAMRRARGSG GRFLNTKKNS TEQSKSGSTV PTQSCNSSVS EHLSSNGDGI SDKRGDGGSM  240
VLNSHKEQSL PNGNSDGHAL FFYLTQSTRN EQPSGHINQD HWSLLVNQVP HGVGPTK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1178187RHKHAMRRAR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.22e-41NF-YA family protein