PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu049162.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Trihelix

Protein Properties

Length: 436aa MW: 49138.2 Da PI: 5.7136

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu049162.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	82.8	4.6e-26	79	166	2	86
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt...sessstcpyfdqle 86 W ++e++aLi +rre++++++++k++k+lW+++s kmrergf rsp++C++kw+nl k++kk k+++ +++ + s +++y++++e Oeu049162.2 79 WVQEETRALISLRREIDSSFNTSKSNKHLWDQISMKMRERGFDRSPTMCTDKWRNLLKEFKKAKQNQDSNQdsnGNGSAKMSYYKDIE 166 ***************************************************************9988887422245678999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 436 aa Download sequence
MYMSEKPQQQ AIDFYNKQET DRNSMIIQVP PHHLITNGGD AAAASSGGGE ENAINENTNN 60 PSFSYDPKST APKKRAETWV QEETRALISL RREIDSSFNT SKSNKHLWDQ ISMKMRERGF 120 DRSPTMCTDK WRNLLKEFKK AKQNQDSNQD SNGNGSAKMS YYKDIEEILR ERSMNEATYR 180 STTPPNSAAA AGGSKVESFL QFPDKGFRFL DFRYKNHHKS CLESFESGFS SAFSDNGLDD 240 AGITFGPVEA NGRSTVNLER RSDHDGHPLA ITAADAVGAS GVSPWNWRGT SGNGEQGQSY 300 DGRVITVKLG DYTKRIGIDG TADAIKEAIK SAFRLRTRRA FWLEDEDNVV RTLDRDMPLG 360 NYTLLVDEGL TIKLYLYEES DHLPVHAEDK TFYSEDDFRD FLSRRGWTCL REFNGYRNID 420 SMDELCPGSV YRGIN*

Sequence ? help Back to Top

Protein Sequence Length: 436 aa Download sequence

MYMSEKPQQQ AIDFYNKQET DRNSMIIQVP PHHLITNGGD AAAASSGGGE ENAINENTNN  60
PSFSYDPKST APKKRAETWV QEETRALISL RREIDSSFNT SKSNKHLWDQ ISMKMRERGF  120
DRSPTMCTDK WRNLLKEFKK AKQNQDSNQD SNGNGSAKMS YYKDIEEILR ERSMNEATYR  180
STTPPNSAAA AGGSKVESFL QFPDKGFRFL DFRYKNHHKS CLESFESGFS SAFSDNGLDD  240
AGITFGPVEA NGRSTVNLER RSDHDGHPLA ITAADAVGAS GVSPWNWRGT SGNGEQGQSY  300
DGRVITVKLG DYTKRIGIDG TADAIKEAIK SAFRLRTRRA FWLEDEDNVV RTLDRDMPLG  360
NYTLLVDEGL TIKLYLYEES DHLPVHAEDK TFYSEDDFRD FLSRRGWTCL REFNGYRNID  420
SMDELCPGSV YRGIN*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25990.1	1e-155	Trihelix family protein