PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu048822.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family YABBY
Protein Properties Length: 185aa    MW: 20666.6 Da    PI: 8.5863
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu048822.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY218.12.6e-6761575169
        YABBY   5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvssekls 102
                  + +e+vCyv+CnfCntilavsvP +s++++vtvrCGhC++llsvn+    q +  ++             ++++++++++  +++e+ s+s+ s+  +
  Oeu048822.1   6 TGAERVCYVHCNFCNTILAVSVPCNSMLTIVTVRCGHCSNLLSVNMGALLQSVHLQD------------FQHQKQQSVTEFATTKECGSSSKCSKLAP 91 
                  5689***************************************99987766554444............44556677888888888888888888889 PP

        YABBY 103 enedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169
                   +++ e pr  p irPPekrqrvPsaynrfikeeiqrika+nP+ishreafs+aaknWahfP+ihfg
  Oeu048822.1  92 FEHEYEQPRLTP-IRPPEKRQRVPSAYNRFIKEEIQRIKAGNPEISHREAFSTAAKNWAHFPHIHFG 157
                  999******999.9****************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MSQDMTGAER VCYVHCNFCN TILAVSVPCN SMLTIVTVRC GHCSNLLSVN MGALLQSVHL  60
QDFQHQKQQS VTEFATTKEC GSSSKCSKLA PFEHEYEQPR LTPIRPPEKR QRVPSAYNRF  120
IKEEIQRIKA GNPEISHREA FSTAAKNWAH FPHIHFGMKL DGNKQAKMDH AVGGEGTQKS  180
LGFY*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08465.12e-81YABBY family protein