PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu048116.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 440aa MW: 48536.4 Da PI: 4.7915

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu048116.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	37.8	3.4e-12	37	75	2	44
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiL 44 r +h+ E+rRR++iN++f+ Lrel+P++ ++K + a++L Oeu048116.1 37 RSKHSVTEQRRRSKINERFQILRELIPHC----DQKRDTASVL 75 899*************************9....6777777766 PP

Sequence ? help Back to Top
Protein Sequence Length: 440 aa Download sequence
MRPGKSHQED EEEDDEEIGT KKTKIDGKNN DKANATRSKH SVTEQRRRSK INERFQILRE 60 LIPHCDQKRD TASVLLEIFS HEYGNWLAMV SAWTATKDCG AQLVLPEVME FVSRLEGGIE 120 GIMTRNQEKV VNYKNFILSP KYPNFIWDGA GFPLEMCSCM VMVGIPGCLD DQECVIQYVQ 180 FLQEKLQKYE GPYQSLNLEP TKLMPWISNL NYYTKLVESQ KTSELGKTEC FCESHVGQAQ 240 AMKNGSGSTF PCRLDENNVR GVPSTMQASH QNPIELEPSG NASGRAVDPQ AELADEAMAI 300 PVSLQASMPA CIPNDGAFSQ TLPKSASVVQ STEDRTASGI MNQEELSVEG GTISISNVYS 360 QRFLNSLTQA LESTGVDLSE ARMSVQINLG KCANRGSTSG ISNAMDHENP MPSGDKSEGH 420 FQDASNSEDA DVARKRQKI*

Sequence ? help Back to Top

Protein Sequence Length: 440 aa Download sequence

MRPGKSHQED EEEDDEEIGT KKTKIDGKNN DKANATRSKH SVTEQRRRSK INERFQILRE  60
LIPHCDQKRD TASVLLEIFS HEYGNWLAMV SAWTATKDCG AQLVLPEVME FVSRLEGGIE  120
GIMTRNQEKV VNYKNFILSP KYPNFIWDGA GFPLEMCSCM VMVGIPGCLD DQECVIQYVQ  180
FLQEKLQKYE GPYQSLNLEP TKLMPWISNL NYYTKLVESQ KTSELGKTEC FCESHVGQAQ  240
AMKNGSGSTF PCRLDENNVR GVPSTMQASH QNPIELEPSG NASGRAVDPQ AELADEAMAI  300
PVSLQASMPA CIPNDGAFSQ TLPKSASVVQ STEDRTASGI MNQEELSVEG GTISISNVYS  360
QRFLNSLTQA LESTGVDLSE ARMSVQINLG KCANRGSTSG ISNAMDHENP MPSGDKSEGH  420
FQDASNSEDA DVARKRQKI*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	7e-35	bHLH family protein