PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047553.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 408aa MW: 44926 Da PI: 9.7583

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047553.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.2	1.9e-10	263	308	6	55
HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +++Er RR ri +++ +L+el P+ +k s a++L + v+YIk+Lq Oeu047553.2 263 SIAERMRRTRISERMKKLQELFPNM----DKQTSIADMLGLSVDYIKDLQ 308 689*******************7....688***************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 408 aa Download sequence
MFSALMNEIR DDDLNQRNQL LYSSGGAMKQ ETEAGTLKNG STSQVVYESG GAIVGSYSIG 60 MENQVQVRMN NGNGNGNGNC SNLVRQSSSP AGFFSAYGVA GEVGNYRVGN GTSAEAHSSA 120 NGLNNYMNFS SSSPSRSRFM PSIPENGNED ISMHNSDNGQ WRNANSANGK EYDATFSKSM 180 WNESSFNQLK RNRDGDSKMF SNFCGSKNPS VETRNNNQGL THHLSLPKTS AEMAAVEKYL 240 QFQSDTVPVQ VRAKRGCATH PRSIAERMRR TRISERMKKL QELFPNMDKQ TSIADMLGLS 300 VDYIKDLQKQ VETLMDKKAK CTCSSKSNQA NSTIHMHRHS RLCRSTHNVS KRRRTLHFQC 360 IQGPRMGKTV FLDSAALDPK SSGKVVGYLR VDVFNSGSKT CLAYGDE*

Sequence ? help Back to Top

Protein Sequence Length: 408 aa Download sequence

MFSALMNEIR DDDLNQRNQL LYSSGGAMKQ ETEAGTLKNG STSQVVYESG GAIVGSYSIG  60
MENQVQVRMN NGNGNGNGNC SNLVRQSSSP AGFFSAYGVA GEVGNYRVGN GTSAEAHSSA  120
NGLNNYMNFS SSSPSRSRFM PSIPENGNED ISMHNSDNGQ WRNANSANGK EYDATFSKSM  180
WNESSFNQLK RNRDGDSKMF SNFCGSKNPS VETRNNNQGL THHLSLPKTS AEMAAVEKYL  240
QFQSDTVPVQ VRAKRGCATH PRSIAERMRR TRISERMKKL QELFPNMDKQ TSIADMLGLS  300
VDYIKDLQKQ VETLMDKKAK CTCSSKSNQA NSTIHMHRHS RLCRSTHNVS KRRRTLHFQC  360
IQGPRMGKTV FLDSAALDPK SSGKVVGYLR VDVFNSGSKT CLAYGDE*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G42280.1	9e-58	bHLH family protein