PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu047511.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family NF-YA
Protein Properties Length: 323aa    MW: 36532.8 Da    PI: 8.6073
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu047511.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA98.38.1e-31185240258
    CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                   p+YVNaKQy++Il+RRq Rakle+++kl +ksrkpylheSRh hAl+R+R+sgGrF
  Oeu047511.1 185 TPIYVNAKQYRAILRRRQIRAKLEAQNKL-AKSRKPYLHESRHLHALKRARSSGGRF 240
                  69***************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 323 aa     Download sequence    
MLNSSTTDRD QQTADSLATF FHRRSSQCQS TRSQQYSLSK GEAAETESVE EYYFDKKQSE  60
CQFHKLDSFS TLSIGQSPYE VAAMERATYS YMQNIACQAD CLETHKMKGE YCIKPSLLYG  120
NADYVAHQVQ WDHNQSIAHI SHPSSESYFS QLVVAYSPNA VIYPQMVGIT TPARVALPLD  180
CRENTPIYVN AKQYRAILRR RQIRAKLEAQ NKLAKSRKPY LHESRHLHAL KRARSSGGRF  240
LNAKNTQQSK PSYKTYGENL SLKQFSKDIS EAEIQHSESS SWGASPANSD FSSILNKHDI  300
FQPPDDRLQL FIDKCAPIST AT*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G14020.11e-39NF-YA family protein