PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047475.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

Protein Properties

Length: 849aa MW: 93863.8 Da PI: 7.5433

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047475.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	42.1	1.5e-13	26	90	31	97
.--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS B3 31 eesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 s++l+++d++ +W++++i r +++ +l++GW++F ++++L ++D+++F + ++ +l+v+v Oeu047475.1 26 LPSQDLVVKDLHETEWQFRHINRSQPKCLLLGSGWSSFLNSKKLVARDTCIFFR--GKTSKLFVGVA 90 34669*************88888888**********************93..36677788886 PP

Sequence ? help Back to Top
Protein Sequence Length: 849 aa Download sequence
MNVKTQIFFC IIPQQYFFLQ DMSRHLPSQD LVVKDLHETE WQFRHINRSQ PKCLLLGSGW 60 SSFLNSKKLV ARDTCIFFRG KTSKLFVGVA ESNMLASLLS SQSIQNGVLV YTFHAISTES 120 LFKEHYYPCL KDHRDSELKG VQKDAAICPD RVSPWSIEVV EIYKSRQKTV LSDVKKARPF 180 NILFPFSVKD GCKRAAFVLL HLKKEVAFGE LQTCLTKNSI EHIRHGHLGV LQGQEFGTVD 240 AYNQQTSARF IIVMKAPYPS LVVFLRIWTL LFPRAPPTFA PRATEYGNEA EKGLFILKLM 300 EYGTALRRSI DLARFNCYGE LVSELDKIFE FNGALIDGSS NWHLSYTDGE IDKMEFWAIV 360 KKMFICPKDF AHSAHARAPF VNNDLHSYVS SPFSYPPPPL CMLKFVEASY LGPSGKGWIF 420 DVETFGAESC RPTVAQLSLE LQGHLNGETP TTENLGNLIR DVQSTGADVV KLLVDVSYIT 480 DVAPIFHMLT HCQVPLIAKA VGDGGLISDK CIPGLPPLAS IKQVYKSEHM NSDTKVFGVV 540 SNPVVDNIGE FLGVYSCDNS QVSEHDPITY SVGIPHKEAA LHYCDEVHHL ARSIGAVNAI 600 VRRPTDGKLV GYNTDCEACI TSIEEAFRER QVANGQESHV SPIAGKLIVL VGASERANAL 660 AKAVAGEALP YECFKEFCPE KGMILASAST VGMEPNVDQT PAPKVALKSY ELVFYAVYTT 720 QNTRLLQEAA EFGAVVVSGV DMFIRQAVGR LKLFAGGLGL VLMKEGKNGN ICTCRAPRRQ 780 YSALAPLSGR LGAMEVAPRR HVSAGEAETG RPAEQPPSPP FLPSFSSSHN SPPRTSFDRP 840 QILDEHKK*

Sequence ? help Back to Top

Protein Sequence Length: 849 aa Download sequence

MNVKTQIFFC IIPQQYFFLQ DMSRHLPSQD LVVKDLHETE WQFRHINRSQ PKCLLLGSGW  60
SSFLNSKKLV ARDTCIFFRG KTSKLFVGVA ESNMLASLLS SQSIQNGVLV YTFHAISTES  120
LFKEHYYPCL KDHRDSELKG VQKDAAICPD RVSPWSIEVV EIYKSRQKTV LSDVKKARPF  180
NILFPFSVKD GCKRAAFVLL HLKKEVAFGE LQTCLTKNSI EHIRHGHLGV LQGQEFGTVD  240
AYNQQTSARF IIVMKAPYPS LVVFLRIWTL LFPRAPPTFA PRATEYGNEA EKGLFILKLM  300
EYGTALRRSI DLARFNCYGE LVSELDKIFE FNGALIDGSS NWHLSYTDGE IDKMEFWAIV  360
KKMFICPKDF AHSAHARAPF VNNDLHSYVS SPFSYPPPPL CMLKFVEASY LGPSGKGWIF  420
DVETFGAESC RPTVAQLSLE LQGHLNGETP TTENLGNLIR DVQSTGADVV KLLVDVSYIT  480
DVAPIFHMLT HCQVPLIAKA VGDGGLISDK CIPGLPPLAS IKQVYKSEHM NSDTKVFGVV  540
SNPVVDNIGE FLGVYSCDNS QVSEHDPITY SVGIPHKEAA LHYCDEVHHL ARSIGAVNAI  600
VRRPTDGKLV GYNTDCEACI TSIEEAFRER QVANGQESHV SPIAGKLIVL VGASERANAL  660
AKAVAGEALP YECFKEFCPE KGMILASAST VGMEPNVDQT PAPKVALKSY ELVFYAVYTT  720
QNTRLLQEAA EFGAVVVSGV DMFIRQAVGR LKLFAGGLGL VLMKEGKNGN ICTCRAPRRQ  780
YSALAPLSGR LGAMEVAPRR HVSAGEAETG RPAEQPPSPP FLPSFSSSHN SPPRTSFDRP  840
QILDEHKK*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62000.3	2e-27	ARF family protein