PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu047234.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

GRF

Protein Properties

Length: 457aa MW: 49330.7 Da PI: 8.2906

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu047234.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.5	1.3e-24	77	121	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e Oeu047234.1 77 DPEPGRCRRTDGKKWRCSREAVADQKYCERHMNRGRHRSRKPVEG 121 79****************************************985 PP
2	QLQ	61.3	2.6e-21	10	46	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++FT++Q+++L++Q+l+yKy++an+P+P++Ll +i++ Oeu047234.1 10 GPFTPSQWMELEHQALIYKYIIANVPIPSYLLNPIRN 46 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 457 aa Download sequence
MQGVLSGVRG PFTPSQWMEL EHQALIYKYI IANVPIPSYL LNPIRNALES AGFSSFSGLR 60 PNASGWGTFH LGFSKTDPEP GRCRRTDGKK WRCSREAVAD QKYCERHMNR GRHRSRKPVE 120 GQSGHSVTGT NTTTTRPMPM ASSTSASVVP GAGASNNLAL SHHCQLNNLQ SGSKNPLSVT 180 QNINRSFTRK ENADEGYQGT TISMLSSNTS LKDSQYSVPK QQNAYAESSC SEFGLVCSDS 240 LLNPLNRSSS FLNSNLNDHE SKSQHPLRQF MDEWPKNPSE CSTISWPDVD MQSDRTQLSI 300 STPVVTSDFM SSTSSPTNEK LTASPLRLSR ELEATQMGLG VGTIVSEQSQ RQTNWFPISW 360 EHSEGGPLGE VLHSTNNSTT DGKNAKALGL MKEGWNSSPF LASSPTGVLQ TGAYGSLSNS 420 SAGSSPRADS SKILDGASLS NGFIGSSLMN PSFPAM*

Sequence ? help Back to Top

Protein Sequence Length: 457 aa Download sequence

MQGVLSGVRG PFTPSQWMEL EHQALIYKYI IANVPIPSYL LNPIRNALES AGFSSFSGLR  60
PNASGWGTFH LGFSKTDPEP GRCRRTDGKK WRCSREAVAD QKYCERHMNR GRHRSRKPVE  120
GQSGHSVTGT NTTTTRPMPM ASSTSASVVP GAGASNNLAL SHHCQLNNLQ SGSKNPLSVT  180
QNINRSFTRK ENADEGYQGT TISMLSSNTS LKDSQYSVPK QQNAYAESSC SEFGLVCSDS  240
LLNPLNRSSS FLNSNLNDHE SKSQHPLRQF MDEWPKNPSE CSTISWPDVD MQSDRTQLSI  300
STPVVTSDFM SSTSSPTNEK LTASPLRLSR ELEATQMGLG VGTIVSEQSQ RQTNWFPISW  360
EHSEGGPLGE VLHSTNNSTT DGKNAKALGL MKEGWNSSPF LASSPTGVLQ TGAYGSLSNS  420
SAGSSPRADS SKILDGASLS NGFIGSSLMN PSFPAM*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	9e-79	GRF family protein