PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Oeu046572.1
Organism
Olea europaea var. sylvestris
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
Family GRAS
Protein Properties Length: 546aa    MW: 61394.9 Da    PI: 6.6697
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Oeu046572.1genomePhytozomeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS93.14.5e-292183831166
         GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetsekn..sseelaalkl..fsevsPilkfs 94 
                  lv+ Ll+ Ae + +++ e+a +lL +  +++s++g+p+qRl++yf eAL +++ r++ ++      ++t++     + + +   l  f+   Pi +++
  Oeu046572.1 218 LVQNLLSSAEKLGEQQYERAIQLLRECDKMSSNRGSPIQRLVFYFNEALYEKIERETGRITPRGLGKKTADPLeaLKCRDST--LiaFHGEMPISQIT 313
                  6899***************************************************777776555444443222123333333..256*********** PP

         GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLa 166
                   l+  qa+ e v+++++vH+iD++i +Gl+ + L+qaL +R  ++  +l+iT+vg    +ske+leet+  L+
  Oeu046572.1 314 KLAGIQALIEHVAEARKVHVIDLEIRNGLHCIILMQALLTRFeNPVKHLKITVVGT---KSKEKLEETAYTLT 383
                  *****************************************945556*********...57899999887776 PP
2GRAS126.82.6e-39389543221374
         GRAS 221 eserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikvErellgreivnvvacegaerrerhetlekWrer 318
                  +++ ++v++++k+++P v++++e ea++ns+ F++rf+eal yy a+fd l+  +  ++++r+  E  +++ +i+n+va+eg+er+ rh + + Wr+ 
  Oeu046572.1 389 PDRLEHVMRVIKTINPGVMIFTEIEANCNSPIFVDRFVEALFYYGAFFDLLADCMKDDEKNRRDAESTCFSSAIRNIVAAEGEERKIRHVSISVWRAF 486
                  456789******************************************************************************************** PP

         GRAS 319 leeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                  + ++G+ +v+ls +   qa+l+l++++ +   + + + ++l++gWk+ pL s+SaW+
  Oeu046572.1 487 FARFGLVEVELSMSSIYQANLVLKNFScGYACTFDMDGKCLTIGWKGTPLSSLSAWK 543
                  ***************************444455567899*****************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 546 aa     Download sequence    
MSNGVFPTDQ FTSDGVKSTE NWGGEKLTNH NGLFGGGEWD LSDFDPFGSS MVVFQAQDSI  60
TRPGFAMSEY QIDRQLKRYT DFVSFDDLYL DVVSLPFRSL DDEYRKLVSI KSQNSELNAP  120
KKKRQYGFPS GSLEILKRYG SRCRRFNGKK GSMPSSEIQY TNSNDPTLSA EIIIRLAAEK  180
FIQSSSTSKC SDEVTLLSHP YSSSILANSA GDSEEVHLVQ NLLSSAEKLG EQQYERAIQL  240
LRECDKMSSN RGSPIQRLVF YFNEALYEKI ERETGRITPR GLGKKTADPL EALKCRDSTL  300
IAFHGEMPIS QITKLAGIQA LIEHVAEARK VHVIDLEIRN GLHCIILMQA LLTRFENPVK  360
HLKITVVGTK SKEKLEETAY TLTTMIGCPD RLEHVMRVIK TINPGVMIFT EIEANCNSPI  420
FVDRFVEALF YYGAFFDLLA DCMKDDEKNR RDAESTCFSS AIRNIVAAEG EERKIRHVSI  480
SVWRAFFARF GLVEVELSMS SIYQANLVLK NFSCGYACTF DMDGKCLTIG WKGTPLSSLS  540
AWKFQ*
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.16e-36GRAS family protein