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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Oeu046309.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea
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Family | C2H2 | ||||||||
Protein Properties | Length: 218aa MW: 24402.7 Da PI: 8.6527 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 21.4 | 6.5e-07 | 66 | 85 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C++C k+F+r nL+ H+ Oeu046309.1 66 FSCHICQKTFNRYNNLQMHM 85 89*****************9 PP | |||||||
2 | zf-C2H2 | 10.8 | 0.0016 | 150 | 172 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C +Cgk+ k + ++H +++ Oeu046309.1 150 FACRKCGKCLAVKGDWRTHEKNC 172 78*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence |
MDLKNPNPGH EEEEDAINVS LHIGPPNCTN VSLDSSDQCS KAANLAAATQ YWIPTPEQIL 60 VGFTHFSCHI CQKTFNRYNN LQMHMWGHGS EYRRGPESLK GAKPRAMLGI PCYCCEEGCK 120 NNINTPRAKP LKDFRTLQTH YKRKHGMKQF ACRKCGKCLA VKGDWRTHEK NCGRRWLCVC 180 GSDFKHKRSL KDHIASFGSG HEPAASSSSS FDGIDVY* |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G34790.1 | 1e-102 | C2H2 family protein |