PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045941.1

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

TCP

Protein Properties

Length: 322aa MW: 33945.5 Da PI: 5.7455

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045941.1	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	83.8	4.1e-26	1	89	24	89
TCP 24 lsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg......................k 89 ++a+caar+F+L++eLG+++d++tieWLlqqa+pai ++tgt++++a+++ + s ++s+s+ ++ Oeu045941.1 1 MPATCAARVFQLTRELGHKSDGETIEWLLQQAEPAILAATGTGTIPANFStLNISLRNSGSTLPAPlwrsaphsfdsalglglsvpraY 89 9**********************************************999777777777774333355555444555555555555551 PP

Sequence ? help Back to Top
Protein Sequence Length: 322 aa Download sequence
MPATCAARVF QLTRELGHKS DGETIEWLLQ QAEPAILAAT GTGTIPANFS TLNISLRNSG 60 STLPAPLWRS APHSFDSALG LGLSVPRAYE ENFSQMLGFH HQQSPHLLQA AQFTEGSSGG 120 DGGVCLHKRY REDLFKEEGT SNSQGEGSSS SSSKKFKGYD MQIMHLAAAA GQTPTSLMGH 180 SNMLPTSVPP NITTAAAAST FLTLPVTAGG ASGNGQTLAD NGAVDPTWPA AGPSESPQMS 240 QFPMSARFNY SGNFELQGGI MQQQHLGLRE SNLGMLAALN AYSRGGLNIN FGQAQPVHSP 300 LEPQQQQQTR ANDSGEDDQN T*

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G58100.1	7e-42	TCP family protein