PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Oeu045651.2

Organism

Olea europaea var. sylvestris

Taxonomic ID

158386

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Oleaceae; Oleeae; Olea; Olea europaea; Olea europaea subsp. europaea

Family

bHLH

Protein Properties

Length: 413aa MW: 46552.4 Da PI: 6.449

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Oeu045651.2	genome	Phytozome	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	33.2	9.4e-11	239	284	5	55
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 h ++Er+RR+++ + f L +++P + kK++ +iL A++Y+k+Lq Oeu045651.2 239 HIIAERKRREQLSQLFVALSTIVPGL-----KKMDRTSILGDAIKYLKNLQ 284 899*********************.....9****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 413 aa Download sequence
MFEREVLHAP SLDRHAPPPV AVPRGSPPEA PPPAGYGSNL RLSNRSRVWS ELTIVDSIPL 60 RNHETCRRFG GFLAGGDDWQ LNFQGLENSS FEDRYEFVDE FDEDLAAFLG EETPNILYPE 120 SNPSSSSVIS RSSPTTDLCP SSYPEPKQMA IEPPSKQKKP NDHHLRMPTF HSTSSTPIIL 180 NFSNVNSPQS PQQVNLRSSN QEEKQAVTET FRNSLEARKT ARTTKKTSRV RPPSQTYDHI 240 IAERKRREQL SQLFVALSTI VPGLKKMDRT SILGDAIKYL KNLQDRVNSL EDQVTKQTVE 300 SVIPIKRSEI LVDNEGSIYE KNSFDEQILP EIEAEVCENL IHLRIHIKKH KGYLLRIIGE 360 IEKLNLTIDY TNVTPFGNFA LDISITAQLE KDSGQTLKEI VRTLGSIFQH TP*

Sequence ? help Back to Top

Protein Sequence Length: 413 aa Download sequence

MFEREVLHAP SLDRHAPPPV AVPRGSPPEA PPPAGYGSNL RLSNRSRVWS ELTIVDSIPL  60
RNHETCRRFG GFLAGGDDWQ LNFQGLENSS FEDRYEFVDE FDEDLAAFLG EETPNILYPE  120
SNPSSSSVIS RSSPTTDLCP SSYPEPKQMA IEPPSKQKKP NDHHLRMPTF HSTSSTPIIL  180
NFSNVNSPQS PQQVNLRSSN QEEKQAVTET FRNSLEARKT ARTTKKTSRV RPPSQTYDHI  240
IAERKRREQL SQLFVALSTI VPGLKKMDRT SILGDAIKYL KNLQDRVNSL EDQVTKQTVE  300
SVIPIKRSEI LVDNEGSIYE KNSFDEQILP EIEAEVCENL IHLRIHIKKH KGYLLRIIGE  360
IEKLNLTIDY TNVTPFGNFA LDISITAQLE KDSGQTLKEI VRTLGSIFQH TP*

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	243	248	ERKRRE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37850.1	6e-43	bHLH family protein